Centos
在 CentOS 7 上安裝 iMod
我正在嘗試創建一個 shell 腳本來為我安裝一系列東西。其中之一就是 iMod。我找到了 iMod 的自安裝 shell 腳本，並在我的 bash 控制台上執行了以下命令：
export IMOD_VERSION=4.11.12 export CUDA_VERSION=10.1 wget https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_${IMOD_VERSION}_RHEL7-64_CUDA${CUDA_VERSION}.sh sudo sh imod_${IMOD_VERSION}_RHEL7-64_CUDA${CUDA_VERSION}.sh筆記
重新啟動設備並斷開連接並重新連接後問題仍然存在（通過 SSH，啟動新終端）
安裝輸出
$ export IMOD_VERSION=4.11.12 $ export CUDA_VERSION=10.1 $ wget https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_${IMOD_VERSION}_RHEL7-64_CUDA${CUDA_VERSION}.sh --2022-02-02 03:16:12-- https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_4.11.12_RHEL7-64_CUDA10.1.sh Resolving bio3d.colorado.edu (bio3d.colorado.edu)... 128.138.72.88 Connecting to bio3d.colorado.edu (bio3d.colorado.edu)|128.138.72.88|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 205325213 (196M) [application/x-sh] Saving to: ‘imod_4.11.12_RHEL7-64_CUDA10.1.sh.1’ 100%[===================================================================================================================>] 205,325,213 5.60MB/s in 38s 2022-02-02 03:16:51 (5.21 MB/s) - ‘imod_4.11.12_RHEL7-64_CUDA10.1.sh.1’ saved [205325213/205325213] $ sudo sh imod_4.11.12_RHEL7-64_CUDA10.1.sh This script will install IMOD in /usr/local and rename any previous version, or remove another copy of this version. It will copy IMOD-linux.csh and IMOD-linux.sh to /etc/profile.d You can add the option -h to see a full list of options Enter Y if you want to proceed: y Extracting imod_4.11.12_RHEL7-64_CUDA10.1.tar.gz ... Extracting installIMOD Checking system and package types Saving the Plugins directory in the existing installation Removing link to previous version but leaving previous version Removing an existing copy of the same version... Unpacking IMOD in /usr/local ... Linking imod_4.11.12 to IMOD Restoring the Plugins directory Copying startup scripts to /etc/profile.d: IMOD-linux.csh IMOD-linux.sh SELinux is enabled - Trying to change security context of libraries. The installation of IMOD 4.11.12 is complete. You may need to start a new terminal window for changes to take effect If there are version-specific IMOD startup commands in individual user startup files (.cshrc, .bashrc, .bash_profile) they should be changed or removed. Cleaning up imod_4.11.12_RHEL7-64_CUDA10.1.tar.gz, installIMOD, and IMODtempDir
我有時間嘗試重現您的問題。
庫存 CentOS 7.9 最小。
然後：
export IMOD_VERSION=4.11.12 export CUDA_VERSION=10.1 wget https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_${IMOD_VERSION}_RHEL7-64_CUDA${CUDA_VERSION}.sh sudo sh imod_${IMOD_VERSION}_RHEL7-64_CUDA${CUDA_VERSION}.sh輸出：
This script will install IMOD in /usr/local and rename any previous version, or remove another copy of this version. It will copy IMOD-linux.csh and IMOD-linux.sh to /etc/profile.d You can add the option -h to see a full list of options Enter Y if you want to proceed: Y Extracting imod_4.11.12_RHEL7-64_CUDA10.1.tar.gz ... Extracting installIMOD Checking system and package types Unpacking IMOD in /usr/local ... Linking imod_4.11.12 to IMOD Copying startup scripts to /etc/profile.d: IMOD-linux.csh IMOD-linux.sh SELinux is enabled - Trying to change security context of libraries. The installation of IMOD 4.11.12 is complete. You may need to start a new terminal window for changes to take effect If there are version-specific IMOD startup commands in individual user startup files (.cshrc, .bashrc, .bash_profile) they should be changed or removed. Cleaning up imod_4.11.12_RHEL7-64_CUDA10.1.tar.gz, installIMOD, and IMODtempDir安裝腳本似乎安裝了以下軟體
/usr/local/IMOD：[test@centos7test ~]$ ll /usr/local/ total 0 <...> lrwxrwxrwx. 1 root root 12 Feb 3 10:31 IMOD -> imod_4.11.12 drwxr-xr-x. 13 1095 111 286 Nov 19 12:32 imod_4.11.12 <...>現在，註銷並登錄到您的 shell 非常重要，因為它需要獲取以下安裝在的程式碼
/etc/profile.d/IMOD-linux.sh：<...> export IMOD_DIR=${IMOD_DIR:=/usr/local/IMOD} # Put the IMOD programs on the path # if ! echo ${PATH} | grep -q "$IMOD_DIR/bin" ; then export PATH=$IMOD_DIR/bin:$PATH fi <...>這反映在您目前的
$PATH環境變數中：[test@centos7test ~]# echo $PATH /usr/local/IMOD/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/root/bin我現在成功地找到並執行了
imod和imodhelp二進製文件：[test@centos7test local]# whereis imod imodhelp imod: /usr/local/imod_4.11.12/bin/imod imodhelp: /usr/local/imod_4.11.12/bin/imodhelp如果由於某種原因您的機器沒有拾取文件，
/etc/profile.d/IMOD-linux.sh您可以像這樣強制執行它：[test@centos7test ~]# source /etc/profile.d/IMOD-linux.sh